PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla019117
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family TCP
Protein Properties Length: 398aa    MW: 42508.6 Da    PI: 7.7033
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla019117genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP129.92.5e-4073182289
        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg............ 88 
                ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s +            
  Cla019117  73 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPsqlrsssyynpn 172
                789******************************************************************9998777777777755555444444444444 PP

        TCP  89 .........k 89 
                          
  Cla019117 173 fslhqqrrtL 182
                4444444440 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036348.9E-4277247IPR005333Transcription factor, TCP
PROSITE profilePS5136927.92379133IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008283Biological Processcell proliferation
GO:0009735Biological Processresponse to cytokinin
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0010029Biological Processregulation of seed germination
GO:0010229Biological Processinflorescence development
GO:0031347Biological Processregulation of defense response
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MEGGDELHHH HHHPHNHHHH RPTFPFQLLE KKDDDAASCS TSSYPSLAIS ADTTTTTTTA  60
VVTSTGEPSK KPPPKRTSTK DRHTKVDGRG RRIRMPALCA ARVFQLTREL GHKSDGETIE  120
WLLQQAEPAV IAATGTGTIP ANFTSLNISL RSSGSSMSVP SQLRSSSYYN PNFSLHQQRR  180
TLFPGFGLSS ETSSTALLNF QSTNIGNSLL QAKPELRDTT SSLDLSEAAD EISIGRKRRP  240
STEQELSSSS SQHQMGGYLL QSSTGTIPAS HGGAQVPANF WMLTNTNNQV MGGDPIWTFP  300
SVNNSGLYRG TMSSGLHFMN FPAPVALVPG QQFGSTTGGG NNSSNEGHLN ILAGLNPYRS  360
VSSSGVMEPQ GSGSHSHHGG GGSNGGGDDR HDTTSHHS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00396DAPTransfer from AT3G47620Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818130.0LN681813.1 Cucumis melo genomic scaffold, anchoredscaffold00030.
GenBankLN7132560.0LN713256.1 Cucumis melo genomic chromosome, chr_2.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004138164.20.0PREDICTED: transcription factor TCP14
RefseqXP_008453196.10.0PREDICTED: transcription factor TCP14
SwissprotQ93Z004e-68TCP14_ARATH; Transcription factor TCP14
TrEMBLF6GT891e-172F6GT89_VITVI; Putative uncharacterized protein
STRINGVIT_17s0000g06020.t011e-172(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21203280
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47620.16e-55TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14